Yes you can. In the Default Domain Policy simply brose to this path: Computer Configuration\Windows Settings\Security Settings\Public Key Policies\Encrypting File System. Right click the Encrypting File System and select Properties. From here you can disable EFS for your users. Below is a more in-depth article.
http://www.windowsecurity.com/articles/Controlling-Encrypting-File-System-EFS-Group-Policy.html
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